BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005H08LP1|AL425441
(455 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1733 853 0.0
>3x_Contig1733
Length = 18615
Score = 853 bits (429), Expect = 0.0
Identities = 449/455 (98%), Gaps = 1/455 (0%)
Strand = Plus / Plus
Query: 1 ccaactcacggccaataccgcccgttcctcctacgatagcgacatatttattatctaaat 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 16147 ccaactcacggccaataccgcccgttcctcctacgatagcaacatatttattatctaaat 16206
Query: 61 tgagttcaatcaatttttgagccttcgtatatacaatatcaggattggtcttcatggttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16207 tgagttcaatcaatttttgagccttcgtatatacaatatcaggattggtcttcatggttg 16266
Query: 121 tttgatgtgagattagtccgatgcaattacaatagatagttcccccttgactcttggtaa 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16267 tttgatgtaagattagtccgatgcaattacaatagatagttcccccttgactcttggtaa 16326
Query: 181 tattactgtgcaagctgcatatctgcratcaacgttgcactaagctaccttaaatagtat 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 16327 tattactgtgcaagctgcatatctgcaatcaacgttgcactaagctaccttaaatagtat 16386
Query: 241 ctatatatgatttcttcgacttattagttacggcggtgatcttttatcgacaatatgtct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16387 ctatatatgatttcttcgacttattagttacggcggtgatcttttatcgacaatatgtct 16446
Query: 301 gactaatgacattgcgattcgtcctgaagattgtagaactggtttggctgtcaaccatca 360
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 16447 gactaatgacattgcgattcgtcctgaagattgt-gaactggtttggctgtcaaccatca 16505
Query: 361 cccctatgaggggccggccccttgaaaaaccgcctccatcacgtgactgabagatctcat 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 16506 cccctatgaggggccggccccttgaaaaaccgcctccatcacgtgactgaaagatctcat 16565
Query: 421 gttaaactatcttgaaccaccaatcaccgcgtatt 455
|| ||||||||||||||||||||||||||||||||
Sbjct: 16566 gtaaaactatcttgaaccaccaatcaccgcgtatt 16600
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2695
Number of Sequences: 1807
Number of extensions: 2695
Number of successful extensions: 58
Number of sequences better than 1.0e-20: 1
length of query: 455
length of database: 10,358,551
effective HSP length: 16
effective length of query: 439
effective length of database: 10,329,639
effective search space: 4534711521
effective search space used: 4534711521
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)